STRINGSTRING
C497_17102 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_17102" - LamB/YcsF family protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_17102LamB/YcsF family protein (253 aa)    
Predicted Functional Partners:
C497_17092
Allophanate hydrolase subunit 1 (300 aa)
   
  0.955
C497_17097
Urea amidolyase-like protein (323 aa)
 
   
  0.925
C497_07489
Natural resistance-associated macrophage protein (401 aa)
 
   
  0.680
HacjB3_14705
Mn2+ and Fe2+ transporter-like protein (422 aa)
   
   
  0.615
C497_14657
Mn2+ and Fe2+ transporter-like protein (426 aa)
   
   
  0.615
C497_17807
Mn2+ and Fe2+ transporter-like protein (411 aa)
   
   
  0.615
C497_05372
Carbamoyl-phosphate synthase L chain ATP-binding protein (608 aa)
   
        0.578
C497_17087
Carbamoyl-phosphate synthase L chain ATP-binding protein (444 aa)
   
        0.578
C497_17787
2-methylcitrate synthase/citrate synthase II (378 aa)
   
        0.461
C497_17127
Biotin/lipoyl attachment domain-containing protein (82 aa)
   
        0.458
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (7%) [HD]