STRINGSTRING
C497_17072 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_17072" - OsmC family protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_17072OsmC family protein (168 aa)    
Predicted Functional Partners:
C497_17067
Major facilitator superfamily protein (426 aa)
              0.642
HacjB3_02240
O-antigen polymerase (401 aa)
              0.616
C497_17082
Hypothetical protein (90 aa)
              0.616
C497_17062
Putative AsnC family transcriptional regulator (137 aa)
              0.479
trpC
Indole-3-glycerol phosphate synthase (250 aa)
              0.446
metX
Homoserine O-acetyltransferase; Involved in the methionine biosynthesis. Catalyzes the transfer of the acetyl group from acetyl-CoA to the hydroxyl group of L-homoserine to yield O-acetyl-L-homoserine (399 aa)
              0.428
C497_12541
Hypothetical protein (249 aa)
   
          0.425
C497_17057
Hypothetical protein (489 aa)
              0.402
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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