STRINGSTRING
C497_16977 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_16977" - Zinc-binding dehydrogenase in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_16977Zinc-binding dehydrogenase (341 aa)    
Predicted Functional Partners:
C497_13131
PfkB domain-containing protein (318 aa)
 
 
  0.949
C497_12501
Sugar hosphotransferase system IIA component (158 aa)
   
 
  0.910
C497_12496
PTS system, fructose subfamily, IIC subunit (381 aa)
       
  0.901
C497_12516
Phosphotransferase system IIB component (156 aa)
       
  0.901
C497_16962
Altronate dehydratase (395 aa)
         
  0.872
C497_16967
Dehydratase (102 aa)
         
  0.872
C497_16972
Altronate dehydratase-like protein (378 aa)
         
  0.872
C497_16997
Putative mandelate racemase (366 aa)
   
   
  0.669
C497_08349
Pyruvate kinase (594 aa)
   
 
  0.669
C497_16982
UspA domain-containing protein (142 aa)
   
   
  0.656
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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