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C497_16722 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_16722" - Cold-shock DNA-binding domain-containing protein in Halalkalicoccus jeotgali
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_16722Cold-shock DNA-binding domain-containing protein (68 aa)    
Predicted Functional Partners:
C497_13503
snRNP-like protein (61 aa)
     
    0.906
dnaK
Molecular chaperone DnaK; Acts as a chaperone (637 aa)
   
  0.870
C497_15678
Peptidylprolyl isomerase (180 aa)
   
  0.866
rpoD
DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (248 aa)
   
  0.861
fusA
Elongation factor EF-2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (729 aa)
     
 
  0.856
C497_09733
DNA-directed RNA polymerase subunit beta’’ (522 aa)
   
  0.854
C497_09728
DNA-directed RNA polymerase subunit B’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (608 aa)
   
  0.854
rpl7ae
50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C’/D’ sRNAs (120 aa)
   
  0.849
hel308
Ski2-like helicase; DNA-dependent ATPase and 3’-5’ DNA helicase that may be involved in repair of stalled replication forks (763 aa)
       
    0.847
C497_19234
DEAD/DEAH box helicase domain-containing protein (778 aa)
       
    0.847
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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