STRINGSTRING
C497_16562 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_16562" - Polysaccharide biosynthesis protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_16562Polysaccharide biosynthesis protein (479 aa)    
Predicted Functional Partners:
HacjB3_10365
Hypothetical protein (298 aa)
 
     
  0.783
C497_09683
dolichol-P-glucose synthetase (602 aa)
   
   
  0.773
HacjB3_01675
Group 1 glycosyl transferase (299 aa)
 
   
  0.760
C497_16527
Family 2 glycosyl transferase (356 aa)
 
   
  0.677
C497_17717
Family 2 glycosyl transferase (320 aa)
 
   
  0.669
C497_12292
Family 2 glycosyl transferase (335 aa)
 
   
  0.656
C497_12526
Coenzyme F420 hydrogenase (524 aa)
 
          0.636
C497_12262
Polysaccharide biosynthesis protein (488 aa)
   
          0.632
C497_12332
Hypothetical protein (331 aa)
 
          0.631
C497_12257
Polysaccharide deacetylase (312 aa)
 
          0.627
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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