STRINGSTRING
C497_16447 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_16447" - Polysaccharide deacetylase in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_16447Polysaccharide deacetylase (355 aa)    
Predicted Functional Partners:
C497_17742
Type I phosphodiesterase/nucleotide pyrophosphatase (541 aa)
   
          0.617
HacjB3_13305
Polysaccharide deacetylase (410 aa)
   
          0.612
C497_17612
Polysaccharide biosynthesis protein (531 aa)
   
          0.607
C497_12352
Type I phosphodiesterase/nucleotide pyrophosphatase (535 aa)
   
          0.592
C497_09128
Hypothetical protein (358 aa)
 
          0.583
C497_12257
Polysaccharide deacetylase (312 aa)
   
          0.577
C497_17597
Hypothetical protein (407 aa)
   
          0.574
C497_12232
ATP-grasp protein-like protein (388 aa)
   
          0.566
C497_16562
Polysaccharide biosynthesis protein (479 aa)
   
          0.566
HacjB3_02925
Major facilitator superfamily protein (389 aa)
   
          0.564
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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