STRINGSTRING
C497_16347 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_16347" - YeeE/YedE family protein family in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_16347YeeE/YedE family protein family (164 aa)    
Predicted Functional Partners:
C497_16352
Hypothetical protein (156 aa)
 
          0.963
C497_16342
Fused rhodanese domain-containing protein/hydrolase (391 aa)
 
          0.927
C497_16337
SirA family protein (81 aa)
   
   
  0.778
HacjB3_02950
Hypothetical protein (321 aa)
 
        0.676
C497_16357
Hypothetical protein (49 aa)
              0.602
C497_16332
Hypothetical protein (192 aa)
              0.589
C497_16367
Transcriptional regulator (134 aa)
 
          0.522
C497_08968
Thiosulfate sulfurtransferase (295 aa)
   
        0.458
C497_10073
Hypothetical protein (107 aa)
              0.445
C497_09743
Rhodanese domain-containing protein (127 aa)
              0.445
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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