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C497_16292 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_16292" - ABC-2 type transporter in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_16292ABC-2 type transporter (112 aa)    
Predicted Functional Partners:
C497_16297
Copper ABC transporter permease (178 aa)
              0.859
C497_18492
Copper ABC transporter ATP-binding protein (302 aa)
 
   
  0.690
HacjB3_01500
ABC transporter-like protein (304 aa)
 
   
  0.681
C497_14647
ABC transporter-like protein (310 aa)
 
   
  0.647
C497_16262
ABC transporter ATP-binding protein (344 aa)
   
   
  0.647
C497_11118
ABC transporter-like protein (306 aa)
   
   
  0.594
C497_05292
ABC transporter-like protein (336 aa)
   
   
  0.594
C497_04060
ABC transporter-like protein (337 aa)
   
   
  0.594
C497_16287
Major facilitator superfamily protein (451 aa)
              0.526
C497_03600
Proliferating cell nuclear antigen (272 aa)
         
  0.456
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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