STRINGSTRING
C497_16117 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_16117" - Binding-protein-dependent transport systems inner membrane component in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_16117Binding-protein-dependent transport systems inner membrane component (616 aa)    
Predicted Functional Partners:
C497_16112
ABC transporter-like protein (361 aa)
 
  0.994
C497_16122
Thiamine-binding periplasmic protein -like protein (355 aa)
 
 
  0.993
C497_13026
ABC transporter-like protein (378 aa)
   
  0.800
C497_05612
ABC transporter-like protein (398 aa)
     
  0.770
C497_05947
ABC transporter ATP-binding protein (381 aa)
     
  0.734
C497_16127
Hypothetical protein (247 aa)
              0.597
C497_13036
iron(III) ABC transporter substrate-binding protein (380 aa)
   
   
  0.546
C497_17637
Hypothetical protein (190 aa)
   
          0.471
C497_12287
Hypothetical protein (197 aa)
   
          0.457
C497_04572
Class V aminotransferase (357 aa)
              0.446
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (9%) [HD]