STRINGSTRING
C497_15463 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_15463" - Class III aminotransferase in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_15463Class III aminotransferase (447 aa)    
Predicted Functional Partners:
C497_08329
L-tyrosine decarboxylase (345 aa)
 
  0.981
C497_11273
Aldehyde dehydrogenase (510 aa)
   
  0.970
C497_12092
Aldehyde dehydrogenase (488 aa)
   
  0.970
C497_14712
Aldehyde dehydrogenase (464 aa)
   
  0.970
C497_08194
Hypothetical protein (256 aa)
         
    0.900
C497_09958
Hypothetical protein (428 aa)
   
   
 
0.837
C497_13643
4-aminobutyrate aminotransferase (447 aa)
   
   
 
0.801
C497_15468
Creatinase (397 aa)
   
        0.725
C497_15473
FAD dependent oxidoreductase (453 aa)
   
        0.651
C497_13780
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein (656 aa)
   
   
  0.607
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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