STRINGSTRING
C497_15308 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_15308" - Ferrichrome-binding protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_15308Ferrichrome-binding protein (377 aa)    
Predicted Functional Partners:
C497_15328
ABC transporter-like protein (292 aa)
       
    0.892
C497_15323
Transport system permease (371 aa)
       
    0.890
C497_15313
Hypothetical protein (244 aa)
              0.856
C497_16827
Hypothetical protein (340 aa)
       
 
0.817
btuC
Corrinoid ABC transporter permease (355 aa)
       
    0.803
C497_14502
ABC transporter ATP-binding protein (411 aa)
       
    0.803
C497_10278
Periplasmic binding protein (305 aa)
         
    0.800
C497_08998
Periplasmic binding protein (296 aa)
         
    0.800
C497_14492
Periplasmic binding protein (354 aa)
         
    0.800
C497_16837
Hypothetical protein (367 aa)
         
 
0.800
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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