STRINGSTRING
C497_15293 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_15293" - ATP-binding protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_15293ATP-binding protein (272 aa)    
Predicted Functional Partners:
HacjB3_12550
PHP domain-containing protein (580 aa)
     
      0.987
HacjB3_04005
AAA ATPase central domain-containing protein (445 aa)
 
          0.933
HacjB3_01665
Nucleotide sugar dehydrogenase (431 aa)
     
      0.709
C497_17662
Nucleotide sugar dehydrogenase (462 aa)
     
      0.709
C497_12936
Malic enzyme (749 aa)
 
          0.571
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (692 aa)
 
          0.565
C497_17867
dephospho-CoA kinase (180 aa)
 
          0.521
C497_14002
Dimethylallyltranstransferase (347 aa)
 
          0.507
C497_15283
Transcriptional regulator-like protein (250 aa)
 
          0.506
C497_09453
Hypothetical protein (237 aa)
 
          0.480
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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