STRINGSTRING
C497_15213 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_15213" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_15213Hypothetical protein (354 aa)    
Predicted Functional Partners:
C497_08893
Glutamate synthase (1518 aa)
   
   
  0.950
C497_15218
Hypothetical protein (477 aa)
              0.614
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate (210 aa)
         
  0.447
C497_11428
Hypothetical protein (221 aa)
              0.446
C497_11608
Cytidine deaminase (130 aa)
              0.446
C497_04902
MiaB-like tRNA modifying protein (414 aa)
              0.446
HacjB3_03205
MgtE integral membrane region (419 aa)
              0.446
C497_18267
Hypothetical protein (206 aa)
              0.446
C497_19309
Hypothetical protein (195 aa)
              0.446
cysS
cysteinyl-tRNA synthetase (495 aa)
              0.444
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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