STRINGSTRING
C497_02842 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_02842" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_02842Hypothetical protein (247 aa)    
Predicted Functional Partners:
radB
DNA repair and recombination protein RadB; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange (247 aa)
              0.796
C497_11398
Hypothetical protein (254 aa)
   
          0.591
C497_14752
Nudix family protein (187 aa)
   
          0.589
C497_09923
Hypothetical protein (221 aa)
   
          0.577
C497_02932
Pyruvoyl-dependent arginine decarboxylase (155 aa)
   
          0.575
C497_13770
Hypothetical protein (168 aa)
   
          0.536
C497_12167
Hypothetical protein (332 aa)
   
          0.534
C497_05437
Hypothetical protein (201 aa)
   
          0.525
rnp2
Ribonuclease P-like protein; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (161 aa)
   
          0.517
C497_11303
Hypothetical protein (343 aa)
 
          0.510
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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