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C497_02957 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_02957" - Nucleic acid-binding protein in Halalkalicoccus jeotgali
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_02957Nucleic acid-binding protein (152 aa)    
Predicted Functional Partners:
C497_15578
KH domain-containing protein (187 aa)
   
  0.991
C497_08794
Serine/threonine protein kinase (301 aa)
     
  0.990
rps8
30S ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (130 aa)
     
  0.947
C497_15563
RIO-like kinase (288 aa)
     
  0.939
C497_11857
PBS lyase HEAT-like repeat domain-containing protein (477 aa)
     
        0.938
C497_04982
Hypothetical protein (363 aa)
     
        0.938
rps8e
30S ribosomal protein S8e (123 aa)
   
    0.922
C497_15383
Putative RNA-binding protein containing PIN domain-containing protein (126 aa)
     
 
  0.921
C497_09133
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (108 aa)
   
 
    0.911
flpA
Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2’-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (210 aa)
     
  0.900
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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