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trmY protein (Halalkalicoccus jeotgali) - STRING interaction network
"trmY" - Hypothetical protein in Halalkalicoccus jeotgali
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
trmYHypothetical protein; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs (198 aa)    
Predicted Functional Partners:
pus10
Hypothetical protein; Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs (442 aa)
         
  0.899
C497_14082
RNA polymerase Rpb4 (118 aa)
 
          0.725
rpl21e
50S ribosomal protein L21e (96 aa)
 
          0.671
C497_10803
Hypothetical protein (116 aa)
   
          0.651
C497_13386
Hypothetical protein (145 aa)
   
          0.650
C497_17492
Radical SAM domain-containing protein (330 aa)
   
          0.642
C497_03600
Proliferating cell nuclear antigen (272 aa)
   
          0.639
C497_05137
Putative transcriptional regulator, containing DNA-binding HTH domain (240 aa)
   
          0.624
C497_17487
Hypothetical protein (361 aa)
   
          0.623
C497_09768
Hypothetical protein (215 aa)
   
          0.621
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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