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C497_04060 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_04060" - ABC transporter-like protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_04060ABC transporter-like protein (337 aa)    
Predicted Functional Partners:
C497_04055
ABC-2 type transporter (297 aa)
  0.990
C497_16257
ABC-2 type transporter (256 aa)
  0.933
C497_11123
ABC-type transport system permease (248 aa)
 
  0.897
C497_05327
Antibiotic transport system permease (169 aa)
  0.878
C497_05297
Antibiotic transport system permease (101 aa)
 
  0.853
C497_11293
ABC transporter-like protein (626 aa)
 
0.780
C497_09888
ABC-type transport system ATP-binding/permease (637 aa)
 
0.779
C497_15183
Short-chain dehydrogenase/reductase SDR (287 aa)
 
 
 
  0.632
C497_16782
ABC transporter ATP-binding protein (231 aa)
 
   
0.632
C497_05347
Oxidoreductase (233 aa)
 
 
 
  0.623
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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