STRINGSTRING
HacjB3_05880 protein (Halalkalicoccus jeotgali) - STRING interaction network
"HacjB3_05880" - Phytoene desaturase in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HacjB3_05880Phytoene desaturase (510 aa)    
Predicted Functional Partners:
HacjB3_05935
Phytoene synthase (319 aa)
 
  0.989
C497_04257
Prenyltransferase (276 aa)
 
   
  0.976
C497_11183
Farnesyl-diphosphate farnesyltransferase (355 aa)
 
   
  0.769
C497_11463
Prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids (277 aa)
 
   
  0.738
C497_04247
Phosphoenolpyruvate carboxylase (902 aa)
 
        0.691
C497_04687
Isopentenyl-diphosphate delta-isomerase (188 aa)
 
     
  0.682
C497_04307
Putative carotenoid biosynthesis protein (277 aa)
 
     
  0.667
C497_15062
Deoxyribodipyrimidine photo-lyase (459 aa)
 
   
  0.583
C497_15057
Prenyltransferase (315 aa)
   
   
  0.544
C497_16417
Phosphoribose diphosphate-decaprenyl-phosphate phosphoribosyltransferase (275 aa)
   
   
  0.544
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (7%) [HD]