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C497_04262 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_04262" - Zinc-transporting ATPase in Halalkalicoccus jeotgali
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
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[Homology]
Score
C497_04262Zinc-transporting ATPase (796 aa)    
Predicted Functional Partners:
C497_12736
Hypothetical protein (63 aa)
     
  0.973
C497_04977
Response regulator receiver protein (122 aa)
   
 
  0.748
rpl6
50S ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (194 aa)
   
 
      0.746
C497_12606
Flavin reductase like domain (191 aa)
   
      0.708
C497_12946
L-lactate permease (565 aa)
     
 
  0.707
rpl2
50S ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (240 aa)
     
      0.701
C497_15937
Alpha amylase catalytic subunit (586 aa)
       
 
  0.698
rpl15
50S ribosomal protein L15P; Binds to the 23S rRNA (173 aa)
       
      0.695
rpl5
50S ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (183 aa)
       
      0.695
rpl29p
50S ribosomal protein L29P (73 aa)
       
      0.695
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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