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phhB protein (Halalkalicoccus jeotgali) - STRING interaction network
"phhB" - Pterin-4-alpha-carbinolamine dehydratase in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phhBPterin-4-alpha-carbinolamine dehydratase (91 aa)    
Predicted Functional Partners:
C497_04487
Hypothetical protein (123 aa)
              0.916
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) (436 aa)
              0.801
C497_04502
Siroheme synthase (214 aa)
              0.723
C497_04507
Heme biosynthesis protein NirGH (354 aa)
              0.710
C497_04482
Haloacid dehalogenase domain-containing protein hydrolase (221 aa)
   
        0.703
C497_08893
Glutamate synthase (1518 aa)
           
  0.597
C497_04512
Hypothetical protein (133 aa)
              0.589
C497_12636
Glycerophosphoryl diester phosphodiesterase (317 aa)
              0.432
C497_04662
Glycerophosphoryl diester phosphodiesterase (272 aa)
              0.432
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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