STRINGSTRING
C497_04587 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_04587" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_04587Hypothetical protein (403 aa)    
Predicted Functional Partners:
C497_04592
Oxidoreductase domain-containing protein (435 aa)
              0.618
C497_12576
Major facilitator superfamily protein (425 aa)
   
          0.608
C497_15218
Hypothetical protein (477 aa)
   
          0.591
C497_19022
Putative PAS/PAC sensor protein (912 aa)
   
          0.521
C497_12931
Major facilitator superfamily protein (408 aa)
   
          0.501
C497_09443
Major facilitator superfamily protein (389 aa)
   
          0.498
C497_12461
Hypothetical protein (56 aa)
   
          0.476
C497_15523
TrkA-C domain-containing protein (609 aa)
   
          0.451
C497_09303
GCN5-like N-acetyltransferase (191 aa)
   
          0.448
C497_12042
Family 2 glycosyl transferase (383 aa)
   
          0.440
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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