STRINGSTRING
C497_04672 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_04672" - Transcriptional regulator in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_04672Transcriptional regulator (136 aa)    
Predicted Functional Partners:
carA
Carbamoyl phosphate synthase small subunit (352 aa)
         
  0.798
C497_11817
Putative AsnC family transcriptional regulator (250 aa)
 
     
  0.705
C497_15598
AsnC family transcriptional regulator (152 aa)
   
     
  0.631
C497_14602
Transcriptional regulator (142 aa)
   
     
  0.624
C497_08893
Glutamate synthase (1518 aa)
   
   
  0.623
C497_07614
Class I and II aminotransferase (373 aa)
         
  0.573
C497_10818
Aspartate aminotransferase (394 aa)
         
  0.573
C497_05907
Class I and II aminotransferase (381 aa)
         
  0.573
C497_16652
Class I and II aminotransferase (391 aa)
         
  0.573
C497_18797
uroporphyrin-III C-methyltransferase (246 aa)
   
   
  0.504
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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