STRINGSTRING
C497_04787 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_04787" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_04787Hypothetical protein (337 aa)    
Predicted Functional Partners:
C497_04782
Mandelate racemase/muconate lactonizing protein (342 aa)
          0.981
menC
Mandelate racemase/muconate lactonizing protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) (339 aa)
 
          0.643
C497_04792
Phosphate transporter (391 aa)
              0.619
C497_16997
Putative mandelate racemase (366 aa)
 
          0.594
C497_04797
Arsenite transport protein (629 aa)
              0.481
HacjB3_15125
Hypothetical protein (121 aa)
              0.446
C497_09198
Mandelate racemase/muconate lactonizing protein (412 aa)
              0.444
C497_12996
Galactonate dehydratase (384 aa)
              0.444
C497_14867
Galactonate dehydratase (391 aa)
              0.444
C497_16657
Mandelate racemase/muconate lactonizing protein (406 aa)
              0.444
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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