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C497_04817 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_04817" - Conditioned medium-induced protein 2 in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_04817Conditioned medium-induced protein 2 (217 aa)    
Predicted Functional Partners:
C497_04812
Hypothetical protein (208 aa)
              0.707
C497_19037
Hypothetical protein (167 aa)
   
     
  0.653
C497_04100
HTR-like protein (309 aa)
   
          0.641
C497_14082
RNA polymerase Rpb4 (118 aa)
   
          0.640
C497_15548
Hypothetical protein (657 aa)
   
          0.636
C497_13503
snRNP-like protein (61 aa)
   
          0.635
C497_09508
ATP-dependent protease Lon (680 aa)
 
     
  0.633
C497_11867
Phosphoesterase RecJ domain-containing protein (627 aa)
   
          0.631
C497_14482
H/ACA RNA-protein complex component Gar1 (75 aa)
 
          0.612
C497_09768
Hypothetical protein (215 aa)
   
          0.607
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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