STRINGSTRING
C497_04912 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_04912" - Cation efflux system protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_04912Cation efflux system protein (309 aa)    
Predicted Functional Partners:
C497_04917
Histidine triad protein (177 aa)
              0.749
C497_04907
Mechanosensitive ion channel MscS (292 aa)
              0.645
C497_04922
Hypothetical protein (66 aa)
              0.547
C497_08714
Repair helicase (612 aa)
              0.446
secD
Preprotein translocase subunit SecD; Involved in protein export (520 aa)
              0.446
secF
Preprotein translocase subunit SecF; Involved in protein export (286 aa)
              0.446
C497_18777
Phosphoesterase DHHA1 (469 aa)
              0.446
C497_09458
Beta-lactamase domain-containing protein (248 aa)
         
  0.439
C497_09218
Beta-lactamase domain-containing protein (380 aa)
         
  0.439
C497_07554
Beta-lactamase domain-containing protein (321 aa)
         
  0.439
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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