STRINGSTRING
C497_05287 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_05287" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_05287Hypothetical protein (235 aa)    
Predicted Functional Partners:
C497_05297
Antibiotic transport system permease (101 aa)
 
          0.685
C497_05292
ABC transporter-like protein (336 aa)
              0.635
sucC
succinyl-CoA synthetase subunit beta (381 aa)
              0.559
C497_05512
Hypothetical protein (282 aa)
   
          0.552
C497_09708
Phosphoesterase PA-phosphatase-like protein (282 aa)
   
          0.535
C497_05277
succinyl-CoA synthetase subunit alpha (289 aa)
              0.422
C497_05517
Family 5 extracellular solute-binding protein (588 aa)
   
          0.400
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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