STRINGSTRING
C497_05452 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_05452" - MarR family transcriptional regulator in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_05452MarR family transcriptional regulator (145 aa)    
Predicted Functional Partners:
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (813 aa)
   
 
  0.731
C497_05457
Major facilitator family multidrug efflux transporter (380 aa)
         
  0.700
C497_05447
Aspartate-semialdehyde dehydrogenase (343 aa)
              0.655
C497_09998
MATE efflux family protein (492 aa)
         
  0.461
C497_08304
MATE efflux family protein (474 aa)
         
  0.461
HacjB3_12885
MATE efflux family protein (40 aa)
         
  0.461
C497_11782
Hypothetical protein (481 aa)
         
  0.461
HacjB3_03105
MATE efflux family protein (500 aa)
         
  0.461
rps17E
30S ribosomal protein S17e (64 aa)
              0.433
C497_05432
triphosphoribosyl-dephospho-CoA protein (274 aa)
   
        0.414
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (14%) [HD]