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HacjB3_07140 protein (Halalkalicoccus jeotgali) - STRING interaction network
"HacjB3_07140" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HacjB3_07140Hypothetical protein (242 aa)    
Predicted Functional Partners:
C497_05557
Transcriptional regulator TrmB (350 aa)
 
          0.709
C497_09048
Putative RNA binding protein (154 aa)
 
          0.625
C497_05547
Hypothetical protein (312 aa)
              0.625
C497_10783
HTR-like protein (389 aa)
   
          0.557
rpl18e
50S ribosomal protein L18e (117 aa)
   
          0.545
C497_07464
ATP-grasp protein-like protein (425 aa)
   
          0.541
C497_11952
Hypothetical protein (130 aa)
   
          0.534
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (430 aa)
   
          0.514
C497_05567
Hypothetical protein (360 aa)
              0.499
C497_05562
Hypothetical protein (66 aa)
              0.499
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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