STRINGSTRING
C497_05862 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_05862" - OsmC family protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_05862OsmC family protein (131 aa)    
Predicted Functional Partners:
C497_05857
OsmC family protein (132 aa)
           
0.611
C497_18892
Cobalt ABC transporter permease (232 aa)
   
          0.586
C497_10083
Hypothetical protein (273 aa)
   
          0.571
C497_10873
Gas vesicle synthesis family protein (152 aa)
   
          0.571
C497_11747
Type IV pilus biogenesis complex membrane subunit (669 aa)
   
          0.562
C497_11952
Hypothetical protein (130 aa)
   
          0.530
C497_12576
Major facilitator superfamily protein (425 aa)
   
          0.528
C497_07464
ATP-grasp protein-like protein (425 aa)
   
          0.522
C497_12626
Helicase (781 aa)
   
          0.512
C497_18942
Hypothetical protein (125 aa)
   
          0.492
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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