STRINGSTRING
C497_15012 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_15012" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_15012Hypothetical protein (150 aa)    
Predicted Functional Partners:
C497_15017
Oxidoreductase (246 aa)
              0.644
C497_14672
Hypothetical protein (487 aa)
   
          0.640
C497_02652
Hypothetical protein (73 aa)
   
          0.633
C497_08379
Hypothetical protein (78 aa)
   
          0.631
C497_11258
Hypothetical protein (74 aa)
   
          0.623
C497_09453
Hypothetical protein (237 aa)
   
          0.612
rpoP
DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (44 aa)
   
          0.609
purO
IMP cyclohydrolase; Catalyzes the cyclization of 5-formylamidoimidazole-4- carboxamide ribonucleotide to IMP (192 aa)
   
          0.608
C497_09838
Hypothetical protein (298 aa)
   
          0.586
C497_02592
Hypothetical protein (150 aa)
   
          0.581
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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