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flpA protein (Halalkalicoccus jeotgali) - STRING interaction network
"flpA" - Fibrillarin in Halalkalicoccus jeotgali
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
flpAFibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2’-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (210 aa)    
Predicted Functional Partners:
C497_14932
Nucleolar protein-like protein (276 aa)
 
  0.999
truB
H/ACA RNA-protein complex component Cbf5p; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (289 aa)
 
 
  0.999
rpl7ae
50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C’/D’ sRNAs (120 aa)
   
  0.999
C497_14482
H/ACA RNA-protein complex component Gar1 (75 aa)
   
 
  0.995
C497_15578
KH domain-containing protein (187 aa)
   
  0.994
rps4e
30S ribosomal protein S4e (236 aa)
   
    0.991
rps3ae
30S ribosomal protein S3Ae (194 aa)
 
    0.989
rps11
30S ribosomal protein S11P; Located on the platform of the 30S subunit (129 aa)
   
    0.987
rps7
30S ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (204 aa)
   
    0.987
rps15
30S ribosomal protein S15P (154 aa)
   
  0.984
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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