STRINGSTRING
C497_14822 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_14822" - Major facilitator superfamily protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_14822Major facilitator superfamily protein (390 aa)    
Predicted Functional Partners:
C497_14827
Hypothetical protein (129 aa)
   
 
  0.791
C497_14817
Cysteine synthase (322 aa)
   
   
  0.648
C497_13423
Thioredoxin reductase (438 aa)
   
   
  0.552
C497_04792
Phosphate transporter (391 aa)
   
 
  0.528
HacjB3_07125
Polysaccharide deacetylase (330 aa)
   
          0.527
C497_04055
ABC-2 type transporter (297 aa)
 
 
  0.496
C497_11123
ABC-type transport system permease (248 aa)
 
 
  0.487
C497_13186
Inosine-5’-monophosphate dehydrogenase (493 aa)
 
 
  0.475
C497_16447
Polysaccharide deacetylase (355 aa)
   
          0.473
C497_08789
Excinuclease ABC subunit A (981 aa)
         
  0.468
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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