STRINGSTRING
C497_14742 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_14742" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_14742Hypothetical protein (138 aa)    
Predicted Functional Partners:
C497_14747
Hypothetical protein (65 aa)
              0.898
rnp2
Ribonuclease P-like protein; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (161 aa)
 
          0.777
rnp3
Ribonuclease P; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (233 aa)
 
          0.772
C497_14737
Cationic amino acid transporter (458 aa)
              0.669
C497_17872
Hypothetical protein (137 aa)
   
     
  0.656
C497_14752
Nudix family protein (187 aa)
              0.643
C497_05167
Hypothetical protein (157 aa)
   
          0.638
mutS2
DNA mismatch repair protein MutS domain-containing protein; Has ATPase and non-specific DNA-binding activities (658 aa)
   
          0.635
purO
IMP cyclohydrolase; Catalyzes the cyclization of 5-formylamidoimidazole-4- carboxamide ribonucleotide to IMP (192 aa)
   
          0.634
C497_03402
Hypothetical protein (285 aa)
 
          0.633
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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