STRINGSTRING
C497_14527 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_14527" - Fla cluster protein flaF in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_14527Fla cluster protein flaF (148 aa)    
Predicted Functional Partners:
C497_14532
Fla cluster protein flaG (151 aa)
         
  0.921
C497_14522
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella (284 aa)
         
  0.827
C497_14537
Hypothetical protein (154 aa)
              0.735
C497_14542
Response regulator receiver protein (120 aa)
         
  0.631
C497_14547
Taxis cluster protein CheC 1 (474 aa)
              0.607
C497_11742
Type II secretion system protein E (769 aa)
         
  0.578
C497_14562
Chemotaxis protein CheW (141 aa)
              0.403
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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