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rpl18e protein (Halalkalicoccus jeotgali) - STRING interaction network
"rpl18e" - 50S ribosomal protein L18e in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl18e50S ribosomal protein L18e (117 aa)    
Predicted Functional Partners:
C497_03500
50S ribosomal protein L32e (234 aa)
 
  0.999
rpl13
50S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (145 aa)
   
  0.999
rps9
30S ribosomal protein S9P (131 aa)
   
  0.999
rpl31e
50S ribosomal protein L31e (92 aa)
   
  0.999
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (149 aa)
 
  0.999
C497_08814
50S ribosomal protein L15e (190 aa)
   
  0.999
rpl18
50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (183 aa)
 
  0.999
rps2
30S ribosomal protein S2 (271 aa)
 
  0.999
rpl30p
50S ribosomal protein L30 (154 aa)
 
  0.999
rpl21e
50S ribosomal protein L21e (96 aa)
 
  0.999
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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