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C497_13623 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_13623" - HhH-GPD family protein in Halalkalicoccus jeotgali
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_13623HhH-GPD family protein (298 aa)    
Predicted Functional Partners:
C497_13628
Hypothetical protein (326 aa)
              0.779
C497_03600
Proliferating cell nuclear antigen (272 aa)
   
 
  0.774
pcn
Proliferating cell nuclear antigen; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication (247 aa)
   
 
  0.774
C497_13618
NADPH-dependent FMN reductase (195 aa)
              0.758
nfo
DNA-(apurinic or apyrimidinic site) lyase; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5’-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin (276 aa)
     
   
  0.616
C497_09953
Replication factor A (482 aa)
     
      0.603
C497_13251
Nucleic acid binding OB-fold tRNA/helicase-type (422 aa)
     
      0.603
C497_17517
Nucleic acid binding OB-fold tRNA/helicase-type (309 aa)
     
      0.603
polB
DNA-directed DNA polymerase; Possesses two activities- a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3’ to 5’ direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase (524 aa)
     
        0.578
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning (1195 aa)
   
   
  0.565
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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