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tdk protein (Halalkalicoccus jeotgali) - STRING interaction network
"tdk" - Thymidine kinase in Halalkalicoccus jeotgali
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdkThymidine kinase (179 aa)    
Predicted Functional Partners:
tmk
Thymidylate kinase (192 aa)
     
 
  0.927
thyX
Thymidylate synthase thyX; Catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate (247 aa)
   
 
  0.924
C497_11608
Cytidine deaminase (130 aa)
   
 
  0.923
C497_04882
S-methyl-5-thioadenosine phosphorylase (242 aa)
         
  0.914
C497_11603
Uridine phosphorylase (274 aa)
         
  0.913
C497_08429
Deoxyuridine 5’-triphosphate nucleotidohydrolase (164 aa)
       
  0.904
C497_13608
Hypothetical protein (206 aa)
              0.878
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (256 aa)
     
 
  0.802
topA
DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superco [...] (853 aa)
 
 
  0.697
C497_13603
Hypothetical protein (684 aa)
              0.674
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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