STRINGSTRING
C497_13488 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_13488" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_13488Hypothetical protein (187 aa)    
Predicted Functional Partners:
C497_15353
Electron transport protein SCO1/SenC (231 aa)
 
          0.617
C497_10123
Hypothetical protein (376 aa)
   
          0.552
C497_13483
Hypothetical protein (408 aa)
              0.543
C497_13478
DNA binding domain-containing protein (164 aa)
 
          0.538
C497_11123
ABC-type transport system permease (248 aa)
 
          0.530
C497_11083
Cytochrome-c-like terminal oxidase subunit II (301 aa)
 
          0.524
ctaB
Heme synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (488 aa)
              0.499
C497_02692
Hypothetical protein (579 aa)
   
          0.491
C497_13755
Putative serine protein kinase PrkA (758 aa)
   
          0.489
HacjB3_12060
Cytochrome-c oxidase (625 aa)
              0.446
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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