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C497_13336 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_13336" - Ribosome maturation protein SBDS-like protein in Halalkalicoccus jeotgali
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second shell of interactors
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filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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C497_13336Ribosome maturation protein SBDS-like protein (241 aa)    
Predicted Functional Partners:
fusA
Elongation factor EF-2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (729 aa)
 
 
  0.918
psmA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (255 aa)
 
        0.911
eif6
Translation initiation factor eIF-6; Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex (221 aa)
   
 
  0.905
rpl3
50S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (337 aa)
 
 
      0.903
rpl10
Acidic ribosomal protein P0; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (348 aa)
 
      0.863
HacjB3_04190
50S ribosomal protein L40e (35 aa)
   
 
      0.859
rnp2
Ribonuclease P-like protein; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (161 aa)
   
        0.824
HacjB3_08665
50S ribosomal protein L24E (136 aa)
   
      0.724
rpl6
50S ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (194 aa)
   
      0.714
C497_15353
Electron transport protein SCO1/SenC (231 aa)
       
      0.665
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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