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C497_13161 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_13161" - PRC-barrel domain-containing protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_13161PRC-barrel domain-containing protein (99 aa)    
Predicted Functional Partners:
C497_17517
Nucleic acid binding OB-fold tRNA/helicase-type (309 aa)
   
          0.651
C497_17522
Hypothetical protein (203 aa)
   
          0.651
C497_18662
Signal sequence peptidase (233 aa)
   
          0.651
C497_14477
Hypothetical protein (317 aa)
   
          0.650
C497_14317
Hypothetical protein (101 aa)
   
          0.649
atpE
V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane (193 aa)
   
          0.648
HacjB3_15125
Hypothetical protein (121 aa)
   
          0.647
C497_02952
PRC-barrel domain (81 aa)
   
          0.646
C497_13256
Hypothetical protein (508 aa)
   
          0.645
C497_12037
Oligosaccharyl transferase STT3 subunit (889 aa)
   
          0.644
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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