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C497_13141 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_13141" - ABC transporter periplasmic substrate-binding protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_13141ABC transporter periplasmic substrate-binding protein (355 aa)    
Predicted Functional Partners:
HacjB3_09525
ABC-3 protein (323 aa)
 
 
  0.995
C497_13146
ABC transporter-like protein (248 aa)
 
 
  0.994
C497_13156
Hypothetical protein (305 aa)
              0.728
C497_10343
Glucokinase (325 aa)
     
 
  0.711
C497_13136
Hypothetical protein (156 aa)
              0.648
C497_13131
PfkB domain-containing protein (318 aa)
              0.551
C497_10038
Iron (metal) dependent repressor, DtxR family protein (228 aa)
         
  0.535
C497_10488
Iron-dependent repressor (147 aa)
         
  0.535
C497_14292
Cobalamin synthesis protein P47K (361 aa)
         
  0.517
C497_18982
Cobalamin synthesis protein P47K (377 aa)
         
  0.517
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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