STRINGSTRING
C497_13011 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_13011" - Transposase and inactivated derivatives-like protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_13011Transposase and inactivated derivatives-like protein (137 aa)    
Predicted Functional Partners:
C497_13016
Alcohol dehydrogenase GroES domain-containing protein (350 aa)
 
          0.572
C497_07674
DNA repair protein Rad25 (454 aa)
   
          0.494
C497_04302
Hypothetical protein (530 aa)
   
          0.449
HacjB3_09670
Kinetochore-Ndc80 complex subunit Spc25 (636 aa)
   
          0.439
C497_07664
Hypothetical protein (501 aa)
   
          0.407
C497_13021
Ferredoxin (106 aa)
              0.403
C497_09188
Endonuclease/exonuclease/phosphatase family protein (364 aa)
   
          0.402
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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