STRINGSTRING
C497_12836 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_12836" - Cation transporter in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_12836Cation transporter (508 aa)    
Predicted Functional Partners:
HacjB3_04140
TrkA-N domain family protein (638 aa)
 
 
  0.994
C497_12826
TrkA domain-containing protein (226 aa)
 
 
  0.981
C497_11812
Potassium transporter peripheral membrane component (438 aa)
 
 
  0.958
C497_10713
Potassium transporter peripheral membrane component (445 aa)
 
 
  0.958
HacjB3_05000
TrkA-N domain-containing protein (210 aa)
 
 
  0.948
C497_02792
TRK potassium uptake system protein (224 aa)
 
 
  0.948
C497_11817
Putative AsnC family transcriptional regulator (250 aa)
 
 
  0.908
HacjB3_07345
Sodium/hydrogen exchanger (410 aa)
     
 
  0.698
C497_16822
TrkA-N domain-containing protein (409 aa)
     
 
  0.698
C497_12831
Hypothetical protein (43 aa)
              0.666
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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