STRINGSTRING
C497_12766 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_12766" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_12766Hypothetical protein (218 aa)    
Predicted Functional Partners:
C497_12771
Hypothetical protein (238 aa)
              0.707
C497_12761
Halocyanin domain-containing protein (161 aa)
              0.707
C497_10463
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase (260 aa)
 
          0.536
C497_12756
Cupin 2 barrel domain-containing protein (106 aa)
              0.527
C497_14892
Hypothetical protein (271 aa)
 
          0.521
C497_16217
NAD-dependent epimerase/dehydratase (311 aa)
 
          0.517
C497_15892
NAD-dependent epimerase/dehydratase (296 aa)
 
          0.511
C497_16777
NAD-dependent epimerase/dehydratase (311 aa)
 
          0.511
HacjB3_02890
NAD-dependent epimerase/dehydratase (366 aa)
 
          0.510
C497_04712
Molybdenum cofactor biosynthesis protein B (202 aa)
 
          0.508
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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