STRINGSTRING
C497_12576 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_12576" - Major facilitator superfamily protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_12576Major facilitator superfamily protein (425 aa)    
Predicted Functional Partners:
C497_12581
tyrosyl-tRNA synthetase (344 aa)
              0.637
C497_09443
Major facilitator superfamily protein (389 aa)
   
          0.619
C497_04587
Hypothetical protein (403 aa)
   
          0.608
C497_12571
Response regulator receiver protein (183 aa)
              0.571
C497_15218
Hypothetical protein (477 aa)
   
          0.568
C497_05862
OsmC family protein (131 aa)
   
          0.528
C497_18892
Cobalt ABC transporter permease (232 aa)
   
          0.522
C497_07659
Major facilitator superfamily protein (390 aa)
   
          0.519
C497_12097
Glyoxalase/bleomycin resistance protein/dioxygenase (224 aa)
   
          0.513
C497_08559
Hypothetical protein (106 aa)
   
          0.486
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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