STRINGSTRING
C497_12541 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_12541" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_12541Hypothetical protein (249 aa)    
Predicted Functional Partners:
C497_12546
Metal-dependent hydrolase (352 aa)
 
          0.963
C497_12551
Alcohol dehydrogenase (345 aa)
 
          0.920
C497_05582
Membrane-flanked domain-containing protein (179 aa)
 
          0.532
C497_10873
Gas vesicle synthesis family protein (152 aa)
   
          0.469
C497_13016
Alcohol dehydrogenase GroES domain-containing protein (350 aa)
              0.440
C497_17072
OsmC family protein (168 aa)
   
          0.425
HacjB3_04815
Sodium/calcium exchanger membrane subunit (399 aa)
   
          0.409
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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