STRINGSTRING
C497_12237 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_12237" - Low molecular weight protein-tyrosine-phosphatase in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_12237Low molecular weight protein-tyrosine-phosphatase (193 aa)    
Predicted Functional Partners:
C497_13885
ATP-binding protein Mrp 1; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (346 aa)
   
 
  0.907
C497_12232
ATP-grasp protein-like protein (388 aa)
 
          0.895
C497_08584
Thioredoxin domain-containing protein (89 aa)
   
 
  0.823
C497_08129
Thioredoxin (112 aa)
   
 
  0.823
C497_14827
Hypothetical protein (129 aa)
   
 
  0.823
HacjB3_07740
Glutaredoxin 2 (82 aa)
   
 
  0.823
C497_05892
Thiol-disulfide isomerase/thioredoxin (188 aa)
   
 
  0.823
fumC
Fumarate hydratase (468 aa)
   
 
  0.712
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (224 aa)
     
 
  0.569
C497_12242
Hypothetical protein (278 aa)
              0.565
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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