STRINGSTRING
C497_12207 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_12207" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_12207Hypothetical protein (221 aa)    
Predicted Functional Partners:
C497_02932
Pyruvoyl-dependent arginine decarboxylase (155 aa)
   
          0.611
rnp2
Ribonuclease P-like protein; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (161 aa)
   
          0.570
C497_12222
Hypothetical protein (373 aa)
   
          0.557
C497_15398
Hypothetical protein (182 aa)
 
          0.533
C497_15238
Hypothetical protein (339 aa)
   
          0.524
C497_11867
Phosphoesterase RecJ domain-containing protein (627 aa)
   
          0.521
C497_05557
Transcriptional regulator TrmB (350 aa)
   
          0.517
C497_17682
Hypothetical protein (337 aa)
   
          0.509
C497_09768
Hypothetical protein (215 aa)
   
          0.504
C497_14482
H/ACA RNA-protein complex component Gar1 (75 aa)
   
          0.485
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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