STRINGSTRING
C497_12187 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_12187" - PadR-like family transcriptional regulator in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_12187PadR-like family transcriptional regulator (95 aa)    
Predicted Functional Partners:
C497_11123
ABC-type transport system permease (248 aa)
         
  0.468
C497_05327
Antibiotic transport system permease (169 aa)
         
  0.468
C497_05297
Antibiotic transport system permease (101 aa)
         
  0.468
C497_04055
ABC-2 type transporter (297 aa)
         
  0.468
C497_16257
ABC-2 type transporter (256 aa)
         
  0.468
C497_12182
Transcriptional regulator (93 aa)
           
0.459
C497_16282
Chromate transport protein (452 aa)
         
  0.457
C497_12192
Hypothetical protein (79 aa)
              0.452
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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