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ilvC protein (Halalkalicoccus jeotgali) - STRING interaction network
"ilvC" - Ketol-acid reductoisomerase in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvCKetol-acid reductoisomerase (345 aa)    
Predicted Functional Partners:
ilvD
Dihydroxy-acid dehydratase (583 aa)
 
  0.999
C497_12122
Acetolactate synthase, small subunit (224 aa)
 
  0.998
C497_12117
Acetolactate synthase, large subunit, biosynthetic type (584 aa)
 
 
  0.998
C497_14727
Acetolactate synthase (544 aa)
 
 
  0.980
C497_12142
3-isopropylmalate dehydratase, small subunit (230 aa)
 
   
  0.958
C497_12137
Isopropylmalate isomerase large subunit (473 aa)
   
   
  0.953
C497_12147
3-isopropylmalate dehydrogenase (325 aa)
   
   
  0.948
C497_12132
Hypothetical protein (83 aa)
              0.880
C497_12921
Hypothetical protein (538 aa)
 
   
  0.863
C497_17337
Branched-chain amino acid aminotransferase (307 aa)
   
 
  0.837
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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